Find Research outputs

2006

Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus

Khan, A. M., Heiny, A. T., Lee, K. X., Srinivasan, K. N., Tan, T. W., August, J. T. & Brusic, V., 18 Dec 2006, In: BMC Bioinformatics. 7, SUPPL.5, S4.

Research output: Journal Publication › Article › peer-review

Open Access

36 Citations (Scopus)

Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome.

Collins, M. O., Husi, H., Yu, L., Brandon, J. M., Anderson, C. N. G., Blackstock, W. P., Choudhary, J. S. & Grant, S. G. N., Apr 2006, In: Journal of Neurochemistry. 97 Suppl 1, p. 16-23 8 p.

Research output: Journal Publication › Article › peer-review

Open Access

364 Citations (Scopus)

Multi-objective evolutionary algorithm for discovering peptide binding motifs

Rajapakse, M., Schmidt, B. & Brusic, V., 2006, Applications of Evolutionary Computing - EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Proceedings. p. 149-158 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3907 LNCS).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

7 Citations (Scopus)

Oral and inhaled corticosteroids and adrenal insufficiency: A case-control study

Mortimer, K. J., Tata, L. J., Smith, C. J. P., West, J., Harrison, T. W., Tattersfield, A. E. & Hubbard, R. B., May 2006, In: Thorax. 61, 5, p. 405-408 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

86 Citations (Scopus)

Performance evaluation of MULTIEPD1 on prediction of MHC class i binders

Zhang, G. L., Kwoh, C. K., August, J. T. & Brusic, V., 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 307-313 7 p. 4155914. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

PRED^NOD, a prediction server for peptide binding to the H-2^g7 haplotype of the non-obese diabetic mouse

Rajapakse, M., Zhang, G. L., Srinivasan, K. N., Schmidt, B., Petrovsky, N. & Brusic, V., Dec 2006, In: Autoimmunity. 39, 8, p. 645-650 6 p.

Research output: Journal Publication › Article › peer-review

3 Citations (Scopus)

Preliminary study on phase separation mechanism of PAEK/BMI blends and laminated system with morphology

Cheng, Q. F., Fang, Z. P., Yi, X. S., Xu, Y. H., Liang, Z. Q., An, X. F., Li, H. Y. & Liao, J. W., Jun 2006, In: Hangkong Cailiao Xuebao/Journal of Aeronautical Materials. 26, 3, p. 177-182 6 p.

Research output: Journal Publication › Article › peer-review

3 Citations (Scopus)

Reading between the headlines: SARS, Focus and TV current affairs programmes in China

Zhang, X., Sept 2006, In: Media, Culture and Society. 28, 5, p. 715-737 23 p.

Research output: Journal Publication › Article › peer-review

40 Citations (Scopus)

Reliable classification of childhood acute leukaemia from gene expression data using confidence machines

Bellotti, T., Luo, Z. & Gammerman, A., 2006, 2006 IEEE International Conference on Granular Computing. p. 148-153 6 p. 1635774. (2006 IEEE International Conference on Granular Computing).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

18 Citations (Scopus)

Risk of deep vein thrombosis and pulmonary embolism after acute infection in a community setting

Smeeth, L., Cook, C., Thomas, S., Hall, A. J., Hubbard, R. & Vallance, P., 1 Apr 2006, In: The Lancet. 367, 9516, p. 1075-1079 5 p.

Research output: Journal Publication › Article › peer-review

395 Citations (Scopus)

Risk of schizophrenia in people with coeliac disease, ulcerative colitis and Crohn's disease: A general population-based study

West, J., Logan, R. F., Hubbard, R. B. & Card, T. R., Jan 2006, In: Alimentary Pharmacology and Therapeutics. 23, 1, p. 71-74 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

55 Citations (Scopus)

SARS coronavirus nucleocapsid immunodominant T-cell epitope cluster is common to both exogenous recombinant and endogenous DNA-encoded immunogens

Gupta, V., Tabiin, T. M., Sun, K., Chandrasekaran, A., Anwar, A., Yang, K., Chikhlikar, P., Salmon, J., Brusic, V., Marques, E. T. A., Kellathur, S. N. & August, T. J., 30 Mar 2006, In: Virology. 347, 1, p. 127-139 13 p.

Research output: Journal Publication › Article › peer-review

48 Citations (Scopus)

Temporal and antigenic analysis of dengue virus serotype 1 genome polyprotein sequences

Rajapakse, M., Veeramani, A., Gopalakrishnan, K., Ananthanarayan, S., Khan, A. M., Srinivasan, K. N., August, J. T. & Brusic, V., 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 301-306 6 p. 4155913. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Temporal association between the incidence of foot ulceration and the start of dialysis in diabetes mellitus

Game, F. L., Chipchase, S. Y., Hubbard, R., Burden, R. P. & Jeffcoate, W. J., Nov 2006, In: Nephrology Dialysis Transplantation. 21, 11, p. 3207-3210 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

75 Citations (Scopus)

The burden of lung disease

Hubbard, R., Jul 2006, In: Thorax. 61, 7, p. 557-558 2 p.

Research output: Journal Publication › Editorial

Open Access

33 Citations (Scopus)

The role of transmissible diseases in the Holling-Tanner predator-prey model

Haque, M. & Venturino, E., Nov 2006, In: Theoretical Population Biology. 70, 3, p. 273-288 16 p.

Research output: Journal Publication › Article › peer-review

131 Citations (Scopus)

Time dependence of ³He diffusion in the human lung: Measurement in the long-time regime using stimulated echoes

Wang, C., Miller, G. W., Altes, T. A., De Lange, E. E., Cates, G. D. & Mugler, J. P., Aug 2006, In: Magnetic Resonance in Medicine. 56, 2, p. 296-309 14 p.

Research output: Journal Publication › Article › peer-review

Open Access

48 Citations (Scopus)

Toughening of BMI based graphite laminates by Ex-situ concept

Cheng, Q. F., Xu, Y. H. & Yi, X. S., May 2006, In: Cailiao Gongcheng/Journal of Materials Engineering. 5, p. 41-45 5 p.

Research output: Journal Publication › Article › peer-review

Use of inhaled corticosteroids and the risk of fracture

Hubbard, R., Tattersfield, A., Smith, C., West, J., Smeeth, L. & Fletcher, A., Oct 2006, In: Chest. 130, 4, p. 1082-1088 7 p.

Research output: Journal Publication › Article › peer-review

83 Citations (Scopus)

2005

A case control study of age related macular degeneration and use of statins

Smeeth, L., Cook, C., Chakravarthy, U., Hubbard, R. & Fletcher, A. E., Sept 2005, In: British Journal of Ophthalmology. 89, 9, p. 1171-1175 5 p.

Research output: Journal Publication › Article › peer-review

Open Access

55 Citations (Scopus)

Acupuncture for schizophrenia.

Rathbone, J. & Xia, J., 2005, In: Cochrane Database of Systematic Reviews. 4, p. CD005475

Research output: Journal Publication › Review article › peer-review

37 Citations (Scopus)

An update on the functional molecular immunology (FIMM) database

Schönbach, C., Koh, J. L. Y., Flower, D. R. & Brusic, V., 2005, In: Applied Bioinformatics. 4, 1, p. 25-31 7 p.

Research output: Journal Publication › Review article › peer-review

16 Citations (Scopus)

Bupropion and the risk of sudden death: A self-controlled case-series analysis using The Health Improvement Network

Hubbard, R., Lewis, S., West, J., Smith, C., Godfrey, C., Smeeth, L., Farrington, P. & Britton, J., Oct 2005, In: Thorax. 60, 10, p. 848-850 3 p.

Research output: Journal Publication › Article › peer-review

Open Access

51 Citations (Scopus)

CandiVF - Candida albicans virulence factor database

Tongchusak, S., Chaiyaroj, S. C., Veeramani, A., Koh, J. L. Y. & Brusic, V., Dec 2005, In: International Journal of Peptide Research and Therapeutics. 11, 4, p. 271-277 7 p.

Research output: Journal Publication › Article › peer-review

8 Citations (Scopus)

Chinese herbal medicine for schizophrenia.

Rathbone, J., Zhang, L., Zhang, M., Xia, J., Liu, X. & Yang, Y., 2005, In: Cochrane Database of Systematic Reviews. 4, p. CD003444

Research output: Journal Publication › Review article › peer-review

39 Citations (Scopus)

Database warehousing in bioinformatics

Koh, J. L. Y. & Brusic, V., 2005, Bioinformatics Technologies. Springer Berlin Heidelberg, p. 45-62 18 p.

Research output: Chapter in Book/Conference proceeding › Book Chapter › peer-review

2 Citations (Scopus)

Deriving matrix of peptide-MHC interactions in diabetic mouse by genetic algorithm

Rajapakse, M., Wyse, L., Schmidt, B. & Brusic, V., 2005, In: Lecture Notes in Computer Science. 3578, p. 440-447 8 p.

Research output: Journal Publication › Conference article › peer-review

6 Citations (Scopus)

Early life risk factors for atopic dermatitis in Ethiopian children

Haileamlak, A., Dagoye, D., Williams, H., Venn, A. J., Hubbard, R., Britton, J. & Lewis, S. A., Feb 2005, In: Journal of Allergy and Clinical Immunology. 115, 2, p. 370-376 7 p.

Research output: Journal Publication › Article › peer-review

68 Citations (Scopus)

Effects of food stamp participation on body weight and obesity

Chen, Z., Yen, S. T. & Eastwood, D. B., Nov 2005, In: American Journal of Agricultural Economics. 87, 5, p. 1167-1173 7 p.

Research output: Journal Publication › Article › peer-review

80 Citations (Scopus)

Extraction by example: Induction of structural rules for the analysis of molecular sequence data from heterogeneous sources

Miotto, O., Tan, T. W. & Brusic, V., 2005, In: Lecture Notes in Computer Science. 3578, p. 398-405 8 p.

Research output: Journal Publication › Conference article › peer-review

3 Citations (Scopus)

Fertility and pregnancy-related events in women with celiac disease: A population-based cohort study

Tata, L. J., Card, T. R., Logan, R. F. A., Hubbard, R. B., Smith, C. J. P. & West, J., Apr 2005, In: Gastroenterology. 128, 4, p. 849-855 7 p.

Research output: Journal Publication › Article › peer-review

127 Citations (Scopus)

Fuzzy clustering in biochemical analysis of cancer cells

Wang, X. Y., Garibaldi, J. M., Bird, B. & George, M. W., 2005, Proceedings - 4th Conference of the European Society for Fuzzy Logic and Technology and 11th French Days on Fuzzy Logic and Applications, EUSFLAT-LFA 2005 Joint Conference. p. 1118-1123 6 p. (Proceedings - 4th Conference of the European Society for Fuzzy Logic and Technology and 11th French Days on Fuzzy Logic and Applications, EUSFLAT-LFA 2005 Joint Conference).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

General population based study of the impact of tricyclic and selective serotonin reuptake inhibitor antidepressants on the risk of acute myocardial infarction

Tata, L. J., West, J., Smith, C., Farrington, P., Card, T., Smeeth, L. & Hubbard, R., Apr 2005, In: Heart. 91, 4, p. 465-471 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

132 Citations (Scopus)

Information technologies for vaccine research

Brusic, V., August, J. T. & Petrovsky, N., Jun 2005, In: Expert Review of Vaccines. 4, 3, p. 407-417 11 p.

Research output: Journal Publication › Review article › peer-review

27 Citations (Scopus)

John Keats and the Materialist’s Metaphysical Struggle with Suffering

Hogsette, D., 2005.

Research output: Contribution to conference › Paper › peer-review

Lung function and glucose metabolism: An analysis of data from the Third National Health and Nutrition Examination Survey

McKeever, T. M., Weston, P. J., Hubbard, R. & Fogarty, A., 15 Mar 2005, In: American Journal of Epidemiology. 161, 6, p. 546-556 11 p.

Research output: Journal Publication › Review article › peer-review

Open Access

122 Citations (Scopus)

Managing the international recruitment of health workers and teachers: Do the commonwealth agreements provide an answer?

Morgan, W. J., Sives, A. & Appleton, S., Apr 2005, In: Round Table. 94, 379, p. 225-238 14 p.

Research output: Journal Publication › Article › peer-review

22 Citations (Scopus)

Neural models for predicting viral vaccine targets

Zhang, G. L., Khan, A. M., Srinivasan, K. N., August, J. T. & Brusic, V., Oct 2005, In: Journal of Bioinformatics and Computational Biology. 3, 5, p. 1207-1225 19 p.

Research output: Journal Publication › Article › peer-review

29 Citations (Scopus)

One NY-ESO-1-derived epitope that promiscuously binds to multiple HLA-DR and HLA-DP4 molecules and stimulates autologous CD4⁺ Cells from Patients with NY-ESO-1-expressing melanoma

Mandic, M., Castelli, F., Janjic, B., Almunia, C., Andrade, P., Gillet, D., Brusic, V., Kirkwood, J. M., Maillere, B. & Zarour, H. M., 1 Feb 2005, In: Journal of Immunology. 174, 3, p. 1751-1759 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

64 Citations (Scopus)

Predictive vaccinology: Optimisation of predictions using support vector machine classifiers

Bozic, I., Zhang, G. L. & Brusic, V., 2005, In: Lecture Notes in Computer Science. 3578, p. 375-381 7 p.

Research output: Journal Publication › Conference article › peer-review

21 Citations (Scopus)

Prospective gene expression analysis accurately subtypes acute leukaemia in children and establishes a commonality between hyperdiploidy and t(12;21) in acute lymphoblastic leukaemia

Van Delft, F. W., Bellotti, T., Luo, Z., Jones, L. K., Patel, N., Yiannikouris, O., Hill, A. S., Hubank, M., Kempski, H., Fletcher, D., Chaplin, T., Foot, N., Young, B. D., Hann, I. M., Gammerman, A. & Saha, V., 2005, In: British Journal of Haematology. 130, 1, p. 26-35 10 p.

Research output: Journal Publication › Article › peer-review

Open Access

35 Citations (Scopus)

Qualified predictions for microarray and proteomics pattern diagnostics with confidence machines

Bellotti, T., Luo, Z., Gammerman, A., Van Delft, F. W. & Saha, V., Aug 2005, In: International Journal of Neural Systems. 15, 4, p. 247-258 12 p.

Research output: Journal Publication › Article › peer-review

39 Citations (Scopus)

Study on performance of structure part of bismaleimide matrix two-dimensional braided composites

Li, X. G., Li, H. Y., Hu, H. J., Tang, B. M. & Yi, X. S., Aug 2005, In: Cailiao Gongcheng/Journal of Materials Engineering. 8, p. 51-52+58

Research output: Journal Publication › Article › peer-review

1 Citation (Scopus)

Use of nicotine replacement therapy and the risk of acute myocardial infarction, stroke, and death

Hubbard, R., Lewis, S., Smith, C., Godfrey, C., Smeeth, L., Farrington, P. & Britton, J., Dec 2005, In: Tobacco Control. 14, 6, p. 416-421 6 p.

Research output: Journal Publication › Article › peer-review

Open Access

89 Citations (Scopus)

Vaccination and risk of allergic disease [1] (multiple letters)

Hurwitz, E. L., Morgenstern, H., McKeever, T., Lewis, S. & Hubbard, R., Jan 2005, In: American Journal of Public Health. 95, 1, p. 6-7 2 p.

Research output: Journal Publication › Letter › peer-review

Open Access

Validation of the International Study of Asthma and Allergies in Children (ISAAC) and U.K. criteria for atopic eczema in Ethiopian children

Haileamlak, A., Lewis, S. A., Britton, J., Venn, A. J., Woldemariam, D., Hubbard, R. & Williams, H. C., Apr 2005, In: British Journal of Dermatology. 152, 4, p. 735-741 7 p.

Research output: Journal Publication › Article › peer-review

71 Citations (Scopus)

2004

A population based case-control study of cataract and inhaled corticosteroids

Smeeth, L., Boulis, M., Hubbard, R., Fletcher, A. E. & Grasso, C. M., Apr 2004, In: Evidence-Based Eye Care. 5, 2, p. 86-87 2 p.

Research output: Journal Publication › Short survey › peer-review

Application of fluorescence correlation spectroscopy to the measurement of agonist binding to a G-protein coupled receptor at the single cell level

Briddon, S. J., Middleton, R. J., Yates, A. S., George, M. W., Kellam, B. & Hill, S. J., 2004, In: Faraday Discussions. 126, 1, p. 197-207 11 p.

Research output: Journal Publication › Article › peer-review

29 Citations (Scopus)

Bioinformatics tools for identifying T-cell epitopes

Brusic, V. & Flower, D. R., 1 Jan 2004, In: Drug Discovery Today: BIOSILICO. 2, 1, p. 18-23 6 p.

Research output: Journal Publication › Review article › peer-review

18 Citations (Scopus)

Commentary: Does the presence of asthma increase the incidence of coronary heart disease?

Hubbard, R. & West, J., Aug 2004, In: International Journal of Epidemiology. 33, 4, p. 749-750 2 p.

Research output: Journal Publication › Comment/debate

Open Access

1 Citation (Scopus)

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