Find Research outputs

2007

Inhaled corticosteroids and the risk of fracture in chronic obstructive pulmonary disease

Pujades-Rodríguez, M., Smith, C. J. P. & Hubbard, R. B., Aug 2007, In: QJM - Monthly Journal of the Association of Physicians. 100, 8, p. 509-517 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

25 Citations (Scopus)

In silico characterization of immunogenic epitopes presented by HLA-Cw*0401

Tong, J. C., Zhang, Z. H., August, J. T., Brusic, V., Tan, T. W. & Ranganathan, S., 2007, In: Immunome Research. 3, 1, 7.

Research output: Journal Publication › Article › peer-review

Open Access

13 Citations (Scopus)

Long-term T cell memory to human leucocyte antigen-A2 supertype epitopes in humans vaccinated against smallpox

Ostrout, N. D., McHugh, M. M., Tisch, D. J., Moormann, A. M., Brusic, V. & Kazura, J. W., Aug 2007, In: Clinical and Experimental Immunology. 149, 2, p. 265-273 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

11 Citations (Scopus)

Loxapine for schizophrenia

Chakrabarti, A., Bagnall, A., Chue, P., Fenton, M., Palaniswamy, V., Wong, W. & Xia, J., 2007, In: Cochrane Database of Systematic Reviews. 4, CD001943.

Research output: Journal Publication › Review article › peer-review

30 Citations (Scopus)

Novel Developments in Fuzzy Clustering for the Classification of Cancerous Cells Using FTIR Spectroscopy

Wang, X. Y., Garibaldi, J. M., Bird, B. & George, M. W., 11 May 2007, Advances in Fuzzy Clustering and its Applications. John Wiley & Sons, Ltd., p. 405-425 21 p.

Research output: Chapter in Book/Conference proceeding › Book Chapter › peer-review

11 Citations (Scopus)

Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms

Rajapakse, M., Schmidt, B., Feng, L. & Brusic, V., 22 Nov 2007, In: BMC Bioinformatics. 8, 459.

Research output: Journal Publication › Article › peer-review

Open Access

30 Citations (Scopus)

Prediction of supertype-specific HLA class I binding peptides using support vector machines

Zhang, G. L., Bozic, I., Kwoh, C. K., August, J. T. & Brusic, V., 30 Mar 2007, In: Journal of Immunological Methods. 320, 1-2, p. 143-154 12 p.

Research output: Journal Publication › Article › peer-review

Open Access

41 Citations (Scopus)

Problem solving skills for schizophrenia

Xia, J. & Li, C., 2007, In: Cochrane Database of Systematic Reviews. 2, CD006365.

Research output: Journal Publication › Review article › peer-review

18 Citations (Scopus)

Proteome informatics for cancer research: From molecules to clinic

Brusic, V., Marina, O., Wu, C. J. & Reinherz, E. L., Mar 2007, In: Proteomics. 7, 6, p. 976-991 16 p.

Research output: Journal Publication › Review article › peer-review

24 Citations (Scopus)

Role of transmissible disease in an infected prey-dependent predator-prey system

Haque, M. & Chattopadhyay, J., Apr 2007, In: Mathematical and Computer Modelling of Dynamical Systems. 13, 2, p. 163-178 16 p.

Research output: Journal Publication › Article › peer-review

22 Citations (Scopus)

Schizophrenia trials in China: A survey

Chakrabarti, A., Adams, C. E., Rathbone, J., Wright, J., Xia, J., Wong, W., Von Reibnitz, P., Koenig, C., Baier, S., Pfeiffer, C., Blatter, J., Mantz, M. & Kloeckner, K., Jul 2007, In: Acta Psychiatrica Scandinavica. 116, 1, p. 6-9 4 p.

Research output: Journal Publication › Review article › peer-review

8 Citations (Scopus)

The growth of bioinformatics

Brusic, V., Mar 2007, In: Briefings in Bioinformatics. 8, 2, p. 69-70 2 p.

Research output: Journal Publication › Editorial

Open Access

4 Citations (Scopus)

The impact of airborne dust on respiratory health in children living in the Aral Sea region

Bennion, P., Hubbard, R., O'hara, S., Wiggs, G., Wegerdt, J., Lewis, S., Small, I., van der meer, J. & Upshur, R., Oct 2007, In: International Journal of Epidemiology. 36, 5, p. 1103-1110 8 p.

Research output: Journal Publication › Article › peer-review

Open Access

65 Citations (Scopus)

The incidence of cancer in patients with idiopathic pulmonary fibrosis and sarcoidosis in the UK

Le Jeune, I., Gribbin, J., West, J., Smith, C., Cullinan, P. & Hubbard, R., Dec 2007, In: Respiratory Medicine. 101, 12, p. 2534-2540 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

271 Citations (Scopus)

The SIS epidemic model with impulsive effects

Jin, Z. & Haque, M., 2007, Proceedings - SNPD 2007: Eighth ACIS International Conference on Software Engineering, Artificial Intelligence, Networking, and Parallel/Distributed Computing. p. 505-507 3 p. 4287905. (Proceedings - SNPD 2007: Eighth ACIS International Conference on Software Engineering, Artificial Intelligence, Networking, and Parallel/Distributed Computing; vol. 3).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

7 Citations (Scopus)

Trends in incidence of skin basal cell carcinoma. Additional evidence from a UK primary care database study

Bath-Hextall, F., Leonardi-Bee, J., Smith, C., Meal, A. & Hubbard, R., 1 Nov 2007, In: International Journal of Cancer. 121, 9, p. 2105-2108 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

167 Citations (Scopus)

Understanding prediction systems for HLA-binding peptides and T-Cell epitope identification

You, L., Zhang, P., Bodén, M. & Brusic, V., 2007, Pattern Recognition in Bioinformatics - Second IAPR International Workshop, PRIB 2007, Proceedings. Springer Verlag, p. 337-348 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4774 LNBI).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Open Access

8 Citations (Scopus)

2006

A focus on the human lens in vitro

Wormstone, I. M., Collison, D. J., Hansom, S. P. & Duncan, G., Feb 2006, In: Environmental Toxicology and Pharmacology. 21, 2 SPEC. ISS., p. 215-221 7 p.

Research output: Journal Publication › Article › peer-review

34 Citations (Scopus)

A systematic bioinformatics approach for selection of epitope-based vaccine targets

Khan, A. M., Miotto, O., Heiny, A. T., Salmon, J., Srinivasan, K. N., Nascimento, E. J. M., Marques, E. T. A., Brusic, V., Tan, T. W. & August, J. T., Dec 2006, In: Cellular Immunology. 244, 2, p. 141-147 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

86 Citations (Scopus)

Complex genomic alterations and gene expression in acute lymphoblastic leukemia with intrachromosomal amplification of chromosome 21

Strefford, J. C., Van Delft, F. W., Robinson, H. M., Worley, H., Yiannikouris, O., Selzer, R., Richmond, T., Hann, I., Bellotti, T., Raghavan, M., Young, B. D., Saha, V. & Harrison, C. J., 23 May 2006, In: Proceedings of the National Academy of Sciences of the United States of America. 103, 21, p. 8167-8172 6 p.

Research output: Journal Publication › Article › peer-review

Open Access

142 Citations (Scopus)

Computational models for identifying promiscuous HLA-B7 binders based on information theory and support vector machine

Zhang, G. L., Tong, J. C., Zhang, Z. H., Zheng, Y., August, J. T., Kwoh, C. K. & Brusic, V., 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 319-323 5 p. 4155916. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Hormone replacement therapy and cataract: A population-based case-control study

Aina, F. O., Smeeth, L., Hubbard, R., Hurt, L. S. & Fletcher, A. E., Apr 2006, In: Eye. 20, 4, p. 417-422 6 p.

Research output: Journal Publication › Article › peer-review

Open Access

30 Citations (Scopus)

Improvement of the impact damage resistance of BMI/graphite laminates by the ex-situ method

Cheng, Q., Fang, Z., Xu, Y. & Yi, X. S., Dec 2006, In: High Performance Polymers. 18, 6, p. 907-917 11 p.

Research output: Journal Publication › Article › peer-review

21 Citations (Scopus)

Incidence and mortality of idiopathic pulmonary fibrosis and sarcoidosis in the UK

Gribbin, J., Hubbard, R. B., Le Jeune, I., Smith, C. J. P., West, J. & Tata, L. J., Nov 2006, In: Thorax. 61, 11, p. 980-985 6 p.

Research output: Journal Publication › Article › peer-review

Open Access

483 Citations (Scopus)

Information management for the study of allergies

Brusic, V., Jan 2006, In: Inflammation and Allergy - Drug Targets. 5, 1, p. 35-42 8 p.

Research output: Journal Publication › Review article › peer-review

6 Citations (Scopus)

Is an internal comparison better than using national data when estimating mortality in longitudinal studies?

Card, T. R., Solaymani-Dodaran, M., Hubbard, R., Logon, R. F. A. & West, J., Sept 2006, In: Journal of Epidemiology and Community Health. 60, 9, p. 819-821 3 p.

Research output: Journal Publication › Article › peer-review

Open Access

47 Citations (Scopus)

Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus

Khan, A. M., Heiny, A. T., Lee, K. X., Srinivasan, K. N., Tan, T. W., August, J. T. & Brusic, V., 18 Dec 2006, In: BMC Bioinformatics. 7, SUPPL.5, S4.

Research output: Journal Publication › Article › peer-review

Open Access

36 Citations (Scopus)

Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome.

Collins, M. O., Husi, H., Yu, L., Brandon, J. M., Anderson, C. N. G., Blackstock, W. P., Choudhary, J. S. & Grant, S. G. N., Apr 2006, In: Journal of Neurochemistry. 97 Suppl 1, p. 16-23 8 p.

Research output: Journal Publication › Article › peer-review

Open Access

362 Citations (Scopus)

Multi-objective evolutionary algorithm for discovering peptide binding motifs

Rajapakse, M., Schmidt, B. & Brusic, V., 2006, Applications of Evolutionary Computing - EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Proceedings. p. 149-158 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3907 LNCS).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

7 Citations (Scopus)

Oral and inhaled corticosteroids and adrenal insufficiency: A case-control study

Mortimer, K. J., Tata, L. J., Smith, C. J. P., West, J., Harrison, T. W., Tattersfield, A. E. & Hubbard, R. B., May 2006, In: Thorax. 61, 5, p. 405-408 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

85 Citations (Scopus)

Performance evaluation of MULTIEPD1 on prediction of MHC class i binders

Zhang, G. L., Kwoh, C. K., August, J. T. & Brusic, V., 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 307-313 7 p. 4155914. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

2 Citations (Scopus)

PRED^NOD, a prediction server for peptide binding to the H-2^g7 haplotype of the non-obese diabetic mouse

Rajapakse, M., Zhang, G. L., Srinivasan, K. N., Schmidt, B., Petrovsky, N. & Brusic, V., Dec 2006, In: Autoimmunity. 39, 8, p. 645-650 6 p.

Research output: Journal Publication › Article › peer-review

3 Citations (Scopus)

Preliminary study on phase separation mechanism of PAEK/BMI blends and laminated system with morphology

Cheng, Q. F., Fang, Z. P., Yi, X. S., Xu, Y. H., Liang, Z. Q., An, X. F., Li, H. Y. & Liao, J. W., Jun 2006, In: Hangkong Cailiao Xuebao/Journal of Aeronautical Materials. 26, 3, p. 177-182 6 p.

Research output: Journal Publication › Article › peer-review

3 Citations (Scopus)

Reading between the headlines: SARS, Focus and TV current affairs programmes in China

Zhang, X., Sept 2006, In: Media, Culture and Society. 28, 5, p. 715-737 23 p.

Research output: Journal Publication › Article › peer-review

40 Citations (Scopus)

Reliable classification of childhood acute leukaemia from gene expression data using confidence machines

Bellotti, T., Luo, Z. & Gammerman, A., 2006, 2006 IEEE International Conference on Granular Computing. p. 148-153 6 p. 1635774. (2006 IEEE International Conference on Granular Computing).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

18 Citations (Scopus)

Risk of deep vein thrombosis and pulmonary embolism after acute infection in a community setting

Smeeth, L., Cook, C., Thomas, S., Hall, A. J., Hubbard, R. & Vallance, P., 1 Apr 2006, In: The Lancet. 367, 9516, p. 1075-1079 5 p.

Research output: Journal Publication › Article › peer-review

391 Citations (Scopus)

Risk of schizophrenia in people with coeliac disease, ulcerative colitis and Crohn's disease: A general population-based study

West, J., Logan, R. F., Hubbard, R. B. & Card, T. R., Jan 2006, In: Alimentary Pharmacology and Therapeutics. 23, 1, p. 71-74 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

55 Citations (Scopus)

SARS coronavirus nucleocapsid immunodominant T-cell epitope cluster is common to both exogenous recombinant and endogenous DNA-encoded immunogens

Gupta, V., Tabiin, T. M., Sun, K., Chandrasekaran, A., Anwar, A., Yang, K., Chikhlikar, P., Salmon, J., Brusic, V., Marques, E. T. A., Kellathur, S. N. & August, T. J., 30 Mar 2006, In: Virology. 347, 1, p. 127-139 13 p.

Research output: Journal Publication › Article › peer-review

Open Access

48 Citations (Scopus)

Temporal and antigenic analysis of dengue virus serotype 1 genome polyprotein sequences

Rajapakse, M., Veeramani, A., Gopalakrishnan, K., Ananthanarayan, S., Khan, A. M., Srinivasan, K. N., August, J. T. & Brusic, V., 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 301-306 6 p. 4155913. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Temporal association between the incidence of foot ulceration and the start of dialysis in diabetes mellitus

Game, F. L., Chipchase, S. Y., Hubbard, R., Burden, R. P. & Jeffcoate, W. J., Nov 2006, In: Nephrology Dialysis Transplantation. 21, 11, p. 3207-3210 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

75 Citations (Scopus)

The burden of lung disease

Hubbard, R., Jul 2006, In: Thorax. 61, 7, p. 557-558 2 p.

Research output: Journal Publication › Editorial

Open Access

33 Citations (Scopus)

The role of transmissible diseases in the Holling-Tanner predator-prey model

Haque, M. & Venturino, E., Nov 2006, In: Theoretical Population Biology. 70, 3, p. 273-288 16 p.

Research output: Journal Publication › Article › peer-review

130 Citations (Scopus)

Time dependence of ³He diffusion in the human lung: Measurement in the long-time regime using stimulated echoes

Wang, C., Miller, G. W., Altes, T. A., De Lange, E. E., Cates, G. D. & Mugler, J. P., Aug 2006, In: Magnetic Resonance in Medicine. 56, 2, p. 296-309 14 p.

Research output: Journal Publication › Article › peer-review

Open Access

48 Citations (Scopus)

Toughening of BMI based graphite laminates by Ex-situ concept

Cheng, Q. F., Xu, Y. H. & Yi, X. S., May 2006, In: Cailiao Gongcheng/Journal of Materials Engineering. 5, p. 41-45 5 p.

Research output: Journal Publication › Article › peer-review

Use of inhaled corticosteroids and the risk of fracture

Hubbard, R., Tattersfield, A., Smith, C., West, J., Smeeth, L. & Fletcher, A., Oct 2006, In: Chest. 130, 4, p. 1082-1088 7 p.

Research output: Journal Publication › Article › peer-review

83 Citations (Scopus)

2005

A case control study of age related macular degeneration and use of statins

Smeeth, L., Cook, C., Chakravarthy, U., Hubbard, R. & Fletcher, A. E., Sept 2005, In: British Journal of Ophthalmology. 89, 9, p. 1171-1175 5 p.

Research output: Journal Publication › Article › peer-review

Open Access

55 Citations (Scopus)

Acupuncture for schizophrenia.

Rathbone, J. & Xia, J., 2005, In: Cochrane Database of Systematic Reviews. 4, p. CD005475

Research output: Journal Publication › Review article › peer-review

37 Citations (Scopus)

An update on the functional molecular immunology (FIMM) database

Schönbach, C., Koh, J. L. Y., Flower, D. R. & Brusic, V., 2005, In: Applied Bioinformatics. 4, 1, p. 25-31 7 p.

Research output: Journal Publication › Review article › peer-review

16 Citations (Scopus)

Bupropion and the risk of sudden death: A self-controlled case-series analysis using The Health Improvement Network

Hubbard, R., Lewis, S., West, J., Smith, C., Godfrey, C., Smeeth, L., Farrington, P. & Britton, J., Oct 2005, In: Thorax. 60, 10, p. 848-850 3 p.

Research output: Journal Publication › Article › peer-review

Open Access

51 Citations (Scopus)

CandiVF - Candida albicans virulence factor database

Tongchusak, S., Chaiyaroj, S. C., Veeramani, A., Koh, J. L. Y. & Brusic, V., Dec 2005, In: International Journal of Peptide Research and Therapeutics. 11, 4, p. 271-277 7 p.

Research output: Journal Publication › Article › peer-review

8 Citations (Scopus)

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