Find Research outputs

2011

Conservation analysis of dengue virust-cell epitope-based vaccine candidates using peptide block entropy

Olsen, L. R., Zhang, G. L., Keskin, D. B., Reinherz, E. L. & Brusic, V., 2011, In: Frontiers in Immunology. 2, DEC, Article 69.

Research output: Journal Publication › Article › peer-review

Open Access

17 Citations (Scopus)

Dana-Farber repository for machine learning in immunology

Zhang, G. L., Lin, H. H., Keskin, D. B., Reinherz, E. L. & Brusic, V., 30 Nov 2011, In: Journal of Immunological Methods. 374, 1-2, p. 18-25 8 p.

Research output: Journal Publication › Article › peer-review

Open Access

31 Citations (Scopus)

Database Resources for Proteomics-Based Analysis of Cancer

Zhang, G. L., DeLuca, D. S. & Brusic, V., 2011, Methods in Molecular Biology. Humana Press Inc., p. 349-364 16 p. (Methods in Molecular Biology; vol. 723).

Research output: Chapter in Book/Conference proceeding › Book Chapter › peer-review

7 Citations (Scopus)

Dealing with complexity through more robust approaches to the evidence-based design of healthcare facilities

Lu, J. & Price, A. D. F., 2011, In: HERD. 4, 4, p. 3-7 5 p.

Research output: Journal Publication › Comment/debate

4 Citations (Scopus)

Decreased csf transferrin in scjd: A potential pre-mortem diagnostic test for prion disorders

Singh, A., Beveridge, A. J. & Singh, N., 2011, In: PLoS ONE. 6, 3, e16804.

Research output: Journal Publication › Article › peer-review

Open Access

23 Citations (Scopus)

Dietary sources and sociodemographic and economic factors affecting vitamin D and calcium intakes in Flemish preschoolers

Huybrechts, I., Lin, Y., De Keyzer, W., Sioen, I., Mouratidou, T., Moreno, L. A., Slimani, N., Jenab, M., Vandevijvere, S., De Backer, G. & De Henauw, S., Sept 2011, In: European Journal of Clinical Nutrition. 65, 9, p. 1039-1047 9 p.

Research output: Journal Publication › Article › peer-review

34 Citations (Scopus)

Dietary sources of animal and plant protein intake among Flemish preschool children and the association with socio-economic and lifestyle-related factors

Lin, Y., Bolca, S., Vandevijvere, S., Van Oyen, H., Van Camp, J., De Backer, G., Foo, L. H., De Henauw, S. & Huybrechts, I., 2011, In: Nutrition Journal. 10, 1, 97.

Research output: Journal Publication › Article › peer-review

Open Access

15 Citations (Scopus)

Dietary sources of fiber intake and its association with socio-economic factors among flemish preschool children

Lin, Y., Bolca, S., Vandevijvere, S., de Keyzer, W., van Oyen, H., van Camp, J., de Backer, G., de Henauw, S. & Huybrechts, I., Mar 2011, In: International Journal of Molecular Sciences. 12, 3, p. 1836-1853 18 p.

Research output: Journal Publication › Article › peer-review

Open Access

6 Citations (Scopus)

Differential microRNA expression and identification of putative miRNA targets and pathways in head and neck cancers

Mutalib, N. S. A., Yoke-Kqueen, C., Rahman, S. A., Sidik, S. M., Singh, A. S. M. & Learn-Han, L., Sept 2011, In: International Journal of Molecular Medicine. 28, 3, p. 327-336 10 p.

Research output: Journal Publication › Article › peer-review

Open Access

61 Citations (Scopus)

Direct identification of an HPV-16 tumor antigen from cervical cancer biopsy specimens

Keskin, D. B., Reinhold, B., Lee, S. Y., Zhang, G., Lank, S., O'Connor, D. H., Berkowitz, R. S., Brusic, V., Kim, S. J. & Reinherz, E. L., 2011, In: Frontiers in Immunology. 2, DEC, Article 75.

Research output: Journal Publication › Article › peer-review

Open Access

31 Citations (Scopus)

Disruption of plasmepsin-4 and merozoites surface protein-7 genes in Plasmodium berghei induces combined virulence-attenuated phenotype

Spaccapelo, R., Aime, E., Caterbi, S., Arcidiacono, P., Capuccini, B., Di Cristina, M., Dottorini, T., Rende, M., Bistoni, F. & Crisanti, A., 2011, In: Scientific Reports. 1, 39.

Research output: Journal Publication › Article › peer-review

Open Access

22 Citations (Scopus)

Does the presence of connective tissue disease modify survival in patients with pulmonary fibrosis?

Navaratnam, V., Ali, N., Smith, C. J. P., McKeever, T., Fogarty, A. & Hubbard, R. B., Dec 2011, In: Respiratory Medicine. 105, 12, p. 1925-1930 6 p.

Research output: Journal Publication › Article › peer-review

Open Access

60 Citations (Scopus)

Efficacy of HLA-DRB1*03:01 and H2E transgenic mouse strains to correlate pathogenic thyroglobulin epitopes for autoimmune thyroiditis

Kong, Y. C. M., Brown, N. K., Flynn, J. C., McCormick, D. J., Brusic, V., Morris, G. P. & David, C. S., Sept 2011, In: Journal of Autoimmunity. 37, 2, p. 63-70 8 p.

Research output: Journal Publication › Article › peer-review

Open Access

6 Citations (Scopus)

Fate and Transfer of Semivolatile Organic Compounds in a Multi-Compartment Environment

Balasubramanian, R. & He, J., 2011, Environmental Science and Engineering. Springer Science and Business Media Deutschland GmbH, p. 277-307 31 p. (Environmental Science and Engineering).

Research output: Chapter in Book/Conference proceeding › Book Chapter › peer-review

1 Citation (Scopus)

Fibre intake among the Belgian population by sexâ€"age and sexâ€"education groups and its association with BMI and waist circumference

Lin, Y., Huybrechts, I., Vandevijvere, S., Bolca, S., De Keyzer, W., De Vriese, S., Polet, A., De Neve, M., Van Oyen, H., Van Camp, J., De Backer, G. & De Henauw, S., 14 Jun 2011, In: British Journal of Nutrition. 105, 11, p. 1692-1703 12 p.

Research output: Journal Publication › Article › peer-review

Open Access

22 Citations (Scopus)

FLAVIdB: A data mining system for knowledge discovery in flaviviruses with direct applications in immunology and vaccinology

Olsen, L. R., Zhang, G. L., Reinherz, E. L. & Brusic, V., 2011, In: Immunome Research. 7, 3, 2.

Research output: Journal Publication › Article › peer-review

24 Citations (Scopus)

Focal biologically inspired feature for glaucoma type classification

Cheng, J., Tao, D., Liu, J., Wong, D. W. K., Lee, B. H., Baskaran, M., Wong, T. Y. & Aung, T., 2011, Medical Image Computing and Computer-Assisted Intervention, MICCAI 2011 - 14th International Conference, Proceedings. PART 3 ed. p. 91-98 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

Open Access

17 Citations (Scopus)

Focal edge association to glaucoma diagnosis

Cheng, J., Liu, J., Wong, D. W. K., Tan, N. M., Lee, B. H., Cheung, C., Baskaran, M., Wong, T. Y. & Aung, T., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 4481-4484 4 p. 6091111. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

12 Citations (Scopus)

Global stability and persistence in LG-Holling type II diseased predator ecosystems

Sarwardi, S., Haque, M. & Venturino, E., Jan 2011, In: Journal of Biological Physics. 37, 1, p. 91-106 16 p.

Research output: Journal Publication › Article › peer-review

Open Access

37 Citations (Scopus)

How close are we to finding noninvasive markers for upper GI tract cancer?

Skipworth, R. J. E., Husi, H. & Ross, J. A., Oct 2011, In: Future Oncology. 7, 10, p. 1121-1124 4 p.

Research output: Journal Publication › Review article › peer-review

How do patient and hospital features influence outcomes in small-cell lung cancer in England

Rich, A. L., Tata, L. J., Free, C. M., Stanley, R. A., Peake, M. D., Baldwin, D. R. & Hubbard, R. B., 6 Sept 2011, In: British Journal of Cancer. 105, 6, p. 746-752 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

33 Citations (Scopus)

Impaired tumor antigen processing by immunoproteasome-expressing CD40-activated B cells and dendritic cells

Anderson, K. S., Zeng, W., Sasada, T., Choi, J., Riemer, A. B., Su, M., Drakoulakos, D., Kang, Y. J., Brusic, V., Wu, C. & Reinherz, E. L., Jun 2011, In: Cancer Immunology, Immunotherapy. 60, 6, p. 857-867 11 p.

Research output: Journal Publication › Article › peer-review

Open Access

9 Citations (Scopus)

Inequalities in outcomes for non-small cell lung cancer: The influence of clinical characteristics and features of the local lung cancer service

Rich, A. L., Tata, L. J., Free, C. M., Stanley, R. A., Peake, M. D., Baldwin, D. R. & Hubbard, R. B., Dec 2011, In: Thorax. 66, 12, p. 1078-1084 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

72 Citations (Scopus)

Influence of knowledge management infrastructure on innovative business processes and market-interrelationship performance: An empirical study of hospitals in Taiwan

Lee, W. T., Hung, S. Y. & Chau, P. Y. K., Apr 2011, In: Journal of Global Information Management. 19, 2, p. 67-89 23 p.

Research output: Journal Publication › Article › peer-review

14 Citations (Scopus)

Information, prices, and healthy lifestyle choices of adults: Discussion

Chen, Z., Jan 2011, In: American Journal of Agricultural Economics. 93, 2, p. 387-388 2 p.

Research output: Journal Publication › Comment/debate

Investigating the detection of adverse drug events in a UK general practice electronic health-care database

Reps, J., Feyereisl, J., Garibaldi, J. M., Aickelin, U., Gibson, J. E. & Hubbard, R. B., 2011, p. 167-172. 6 p.

Research output: Contribution to conference › Paper › peer-review

2 Citations (Scopus)

Is adult height related to the risk of having chronic obstructive pulmonary disease?

Ward, K. & Hubbard, R., Mar 2011, In: Journal of Epidemiology and Community Health. 65, 3, p. 226-229 4 p.

Research output: Journal Publication › Article › peer-review

Open Access

10 Citations (Scopus)

Lung cancer in England: Information from the National Lung Cancer Audit (LUCADA)

Rich, A. L., Tata, L. J., Stanley, R. A., Free, C. M., Peake, M. D., Baldwin, D. R. & Hubbard, R. B., Apr 2011, In: Lung Cancer. 72, 1, p. 16-22 7 p.

Research output: Journal Publication › Article › peer-review

65 Citations (Scopus)

Model-based optic nerve head segmentation on retinal fundus images

Yin, F., Liu, J., Ong, S. H., Sun, Y., Wong, D. W. K., Tan, N. M., Cheung, C., Baskaran, M., Aung, T. & Wong, T. Y., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 2626-2629 4 p. 6090724. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

103 Citations (Scopus)

Morphology of a functional POSS/bismaleimide nanocomposite and its monitoring phase separation with a thermoplastic blend

Hu, X., Yu, R., Liu, G. & Yi, X., 2011, China Postdoctoral Forum on Materials Science and Engineering. p. 166-170 5 p. (Advanced Materials Research; vol. 266).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

1 Citation (Scopus)

Mortality trends in asbestosis, extrinsic allergic alveolitis and sarcoidosis in England and Wales

Hanley, A., Hubbard, R. B. & Navaratnam, V., Sept 2011, In: Respiratory Medicine. 105, 9, p. 1373-1379 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

27 Citations (Scopus)

MULTIPRED2: A computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles

Zhang, G. L., DeLuca, D. S., Keskin, D. B., Chitkushev, L., Zlateva, T., Lund, O., Reinherz, E. L. & Brusic, V., 30 Nov 2011, In: Journal of Immunological Methods. 374, 1-2, p. 53-61 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

58 Citations (Scopus)

Nutrigenomics Hypothesis: Examining the Association Between Food Stamp Program Participation and Bodyweight Among Low-Income Women

Chen, Z. & Zhang, Q., Sept 2011, In: Journal of Family and Economic Issues. 32, 3, p. 508-520 13 p.

Research output: Journal Publication › Article › peer-review

5 Citations (Scopus)

Optimizing vaccine development

Hoft, D. F., Brusic, V. & Sakala, I. G., Jul 2011, In: Cellular Microbiology. 13, 7, p. 934-942 9 p.

Research output: Journal Publication › Short survey › peer-review

Open Access

31 Citations (Scopus)

Outcome of systemic sclerosis associated interstitial lung disease treated with intravenous cyclophosphamide

Abhishek, A., Yazdani, R., Pearce, F., Regan, M., Lim, K., Hubbard, R. & Lanyon, P., Aug 2011, In: Clinical Rheumatology. 30, 8, p. 1099-1104 6 p.

Research output: Journal Publication › Article › peer-review

12 Citations (Scopus)

PB1-F2 Finder: Scanning influenza sequences for PB1-F2 encoding RNA segments

DeLuca, D. S., Keskin, D. B., Zhang, G. L., Reinherz, E. L. & Brusic, V., 30 Nov 2011, In: BMC Bioinformatics. 12, SUPPL. 13, S6.

Research output: Journal Publication › Article › peer-review

Open Access

7 Citations (Scopus)

Plant and animal protein intake and its association with overweight and obesity among the Belgian population

Lin, Y., Bolca, S., Vandevijvere, S., De Vriese, S., Mouratidou, T., De Neve, M., Polet, A., Van Oyen, H., Van Camp, J., De Backer, G., De Henauw, S. & Huybrechts, I., 14 Apr 2011, In: British Journal of Nutrition. 105, 7, p. 1106-1116 11 p.

Research output: Journal Publication › Article › peer-review

Open Access

67 Citations (Scopus)

PRED ^mafa: A system for prediction of peptide binding to several MHC class i molecules in cynomolgus macaques

Zhang, G. L., O'Connor, D. H., Budde, M. L., Hildebrand, W. H., Lhost, J. J. & Brusic, V., 2011, 2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011. p. 602-606 5 p. (2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011).

Research output: Chapter in Book/Conference proceeding › Conference contribution › peer-review

1 Citation (Scopus)

Prescription of teriparatide in the UK - a nationwide register study from 2004 to 2008

Abhishek, A., Pande, I. & Hubbard, R. B., Dec 2011, In: Pharmacoepidemiology and Drug Safety. 20, 12, p. 1327-1333 7 p.

Research output: Journal Publication › Article › peer-review

1 Citation (Scopus)

Prices of Unhealthy Foods, Food Stamp Program Participation, and Body Weight Status Among U.S. Low-Income Women

Zhang, Q., Chen, Z., Diawara, N. & Wang, Y., Jun 2011, In: Journal of Family and Economic Issues. 32, 2, p. 245-256 12 p.

Research output: Journal Publication › Article › peer-review

Open Access

12 Citations (Scopus)

Proteomic analysis of urinary upper gastrointestinal cancer markers

Husi, H., Stephens, N., Cronshaw, A., Macdonald, A., Gallagher, I., Greig, C., Fearon, K. C. H. & Ross, J. A., Jun 2011, In: Proteomics - Clinical Applications. 5, 5-6, p. 289-299 11 p.

Research output: Journal Publication › Article › peer-review

27 Citations (Scopus)

Psychoeducation for schizophrenia

Xia, J., Merinder, L. B. & Belgamwar, M. R., Jan 2011, In: Schizophrenia Bulletin. 37, 1, p. 21-22 2 p.

Research output: Journal Publication › Article › peer-review

Open Access

55 Citations (Scopus)

Psychoeducation for schizophrenia.

Xia, J., Merinder, L. B. & Belgamwar, M. R., 2011, In: Cochrane Database of Systematic Reviews. 6, p. CD002831

Research output: Journal Publication › Review article › peer-review

249 Citations (Scopus)

Real-Time Physiological and Vision Monitoring of Vehicle Driver for Non-Intrusive Drowsiness Detection

Lee, B. G., Jung, S. J. & Chung, W. Y., 25 Nov 2011, In: IET Communications. 5, 17, p. 2461-2469 9 p.

Research output: Journal Publication › Article › peer-review

51 Citations (Scopus)

Risk of falls associated with antihypertensive medication: Self-controlled case series

Gribbin, J., Hubbard, R., Gladman, J., Smith, C. & Lewis, S., Aug 2011, In: Pharmacoepidemiology and Drug Safety. 20, 8, p. 879-884 6 p.

Research output: Journal Publication › Article › peer-review

50 Citations (Scopus)

Serotonin-norepinephrine reuptake inhibitor antidepressants and the risk of falls in older people: Case-control and case-series analysis of a large UK primary care database

Gribbin, J., Hubbard, R., Gladman, J., Smith, C. & Lewis, S., 2011, In: Drugs and Aging. 28, 11, p. 895-902 8 p.

Research output: Journal Publication › Article › peer-review

33 Citations (Scopus)

Serum igE reactivity profiling in an Asthma affected Cohort

Dottorini, T., Sole, G., Nunziangeli, L., Baldracchini, F., Senin, N., Mazzoleni, G., Proietti, C., Balaci, L. & Crisanti, A., 2011, In: PLoS ONE. 6, 8, e22319.

Research output: Journal Publication › Article › peer-review

Open Access

12 Citations (Scopus)

Similarity and degree of perplexity analysis of chinese characters

Zhang, Y., Aug 2011, In: Journal of Quantitative Linguistics. 18, 3, p. 189-206 18 p.

Research output: Journal Publication › Article › peer-review

1 Citation (Scopus)

The biofilm returns: microbial life at the interface

Jain, A., Marsili, E. & Bhosle, N. B., 2011, Microbes and Microbial Technology: Agricultural and Environmental Applications. Ahmad, I., Ahmad, F. & Pichtel, J. (eds.). Springer New York LLC, p. 59-85 27 p.

Research output: Chapter in Book/Conference proceeding › Book Chapter › peer-review

3 Citations (Scopus)

The distribution of lung cancer across sectors of society in the United Kingdom: A study using national primary care data

Iyen-Omofoman, B., Hubbard, R. B., Smith, C. J. P., Sparks, E., Bradley, E., Bourke, A. & Tata, L. J., 2011, In: BMC Public Health. 11, 857.

Research output: Journal Publication › Article › peer-review

Open Access

36 Citations (Scopus)

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