Find Research outputs

2007

The growth of bioinformatics

Brusic, V., Mar 2007, In: Briefings in Bioinformatics. 8, 2, p. 69-70 2 p.

Research output: Journal Publication › Editorial

Open Access

4 Citations (Scopus)

2006

Deduction of functional peptide motifs in scorpion toxins

Tan, P. T. J., Ranganathan, S. & Brusic, V., Jun 2006, In: Journal of Peptide Science. 12, 6, p. 420-427 8 p.

Research output: Journal Publication › Article › peer-review

11 Citations (Scopus)

Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus

Khan, A. M., Heiny, A. T., Lee, K. X., Srinivasan, K. N., Tan, T. W., August, J. T. & Brusic, V., 18 Dec 2006, In: BMC Bioinformatics. 7, SUPPL.5, S4.

Research output: Journal Publication › Article › peer-review

Open Access

36 Citations (Scopus)

Prediction of HLA-DQ3.2β ligands: Evidence of multiple registers in class II binding peptides

Tong, J. C., Zhang, G. L., Tan, T. W., August, J. T., Brusic, V. & Ranganathan, S., 15 May 2006, In: Bioinformatics. 22, 10, p. 1232-1238 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

42 Citations (Scopus)

2005

Neural models for predicting viral vaccine targets

Zhang, G. L., Khan, A. M., Srinivasan, K. N., August, J. T. & Brusic, V., Oct 2005, In: Journal of Bioinformatics and Computational Biology. 3, 5, p. 1207-1225 19 p.

Research output: Journal Publication › Article › peer-review

29 Citations (Scopus)

Proteomic analysis of in vivo phosphorylated synaptic proteins

Collins, M. O., Yu, L., Coba, M. P., Husi, H., Campuzano, I., Blackstock, W. P., Choudhary, J. S. & Grant, S. G. N., 18 Feb 2005, In: Journal of Biological Chemistry. 280, 7, p. 5972-5982 11 p.

Research output: Journal Publication › Article › peer-review

Open Access

292 Citations (Scopus)

2004

Computational methods for prediction of T-cell epitopes - A framework for modelling, testing, and applications

Brusic, V., Bajic, V. B. & Petrovsky, N., Dec 2004, In: Methods. 34, 4, p. 436-443 8 p.

Research output: Journal Publication › Article › peer-review

144 Citations (Scopus)

Prediction of class I T-cell epitopes: Evidence of presence of immunological hot spots inside antigens

Srinivasan, K. N., Zhang, G. L., Khan, A. M., August, J. T. & Brusic, V., 2004, In: Bioinformatics. 20, SUPPL. 1, p. i297-i302

Research output: Journal Publication › Article › peer-review

Open Access

35 Citations (Scopus)

Systematic analysis snake neurotoxins' functional classification using a data warehousing approach

Siew, J. P. Y., Khan, A. M., Tan, P. T. J., Koh, J. L. Y., Seah, S. H., Koo, C. Y., Chai, S. C., Armugam, A., Brusic, V. & Jeyaseelan, K., 12 Dec 2004, In: Bioinformatics. 20, 18, p. 3466-3480 15 p.

Research output: Journal Publication › Article › peer-review

Open Access

13 Citations (Scopus)

Virtual models of the HLA class I antigen processing pathway

Petrovsky, N. & Brusic, V., Dec 2004, In: Methods. 34, 4, p. 429-435 7 p.

Research output: Journal Publication › Article › peer-review

30 Citations (Scopus)

2003

Bioinformatics for venom and toxin sciences.

Tan, P. T. J., Khan, A. M. & Brusic, V., Mar 2003, In: Briefings in Bioinformatics. 4, 1, p. 53-62 10 p.

Research output: Journal Publication › Review article › peer-review

Open Access

37 Citations (Scopus)

Computational Detection of Vertebrate RNA Polymerase II Promoters

Bajic, V. B. & Brusic, V., 2003, In: Methods in Enzymology. 370, p. 237-250 14 p.

Research output: Journal Publication › Article › peer-review

8 Citations (Scopus)

From immunoinformatics to immunomics.

Brusic, V., Apr 2003, In: Journal of Bioinformatics and Computational Biology. 1, 1, p. 179-181 3 p.

Research output: Journal Publication › Article › peer-review

11 Citations (Scopus)

Identification of PSD-93 as a Substrate for the Src Family Tyrosine Kinase Fyn

Nada, S., Shima, T., Yanai, H., Husi, H., Grant, S. G. N., Okada, M. & Akiyama, T., 28 Nov 2003, In: Journal of Biological Chemistry. 278, 48, p. 47610-47621 12 p.

Research output: Journal Publication › Article › peer-review

Open Access

48 Citations (Scopus)

Molecular evolution and phylogeny of elapid snake venom three-finger toxins

Fry, B. G., Wüster, W., Kini, R. M., Brusic, V., Khan, A., Venkataraman, D. & Rooney, A. P., 1 Jul 2003, In: Journal of Molecular Evolution. 57, 1, p. 110-129 20 p.

Research output: Journal Publication › Article › peer-review

Open Access

297 Citations (Scopus)

2002

Dragon promoter finder: Recognition of vertebrate RNA polymerase II promoters

Bajic, V. B., Seah, S. H., Chong, A., Zhang, G., Koh, J. L. Y. & Brusic, V., 2002, In: Bioinformatics. 18, 1, p. 198-199 2 p.

Research output: Journal Publication › Article › peer-review

Open Access

81 Citations (Scopus)

Methods for prediction of peptide binding to MHC molecules: A comparative study

Yu, K., Petrovsky, N., Schönbach, C., Koh, J. L. Y. & Brusic, V., 2002, In: Molecular Medicine. 8, 3, p. 137-148 12 p.

Research output: Journal Publication › Article › peer-review

Open Access

126 Citations (Scopus)

Structural and electronic properties of endohedral phosphorus fullerene P@C₆₀: An off-centre displacement of P inside the cage

Larsson, J. A. & Greer, J. C., 10 Nov 2002, In: Molecular Physics. 100, 21, p. 3475-3477 3 p.

Research output: Journal Publication › Comment/debate

2 Citations (Scopus)

2001

A-fibres sprouting from lamina I into lamina II of spinal dorsal horn after peripheral nerve injury in rats

Ma, Q. P. & Tian, L., 15 Jun 2001, In: Brain Research. 904, 1, p. 137-140 4 p.

Research output: Journal Publication › Article › peer-review

11 Citations (Scopus)

2000

Data warehousing in molecular biology.

Schönbach, C., Kowalski-Saunders, P. & Brusic, V., May 2000, In: Briefings in Bioinformatics. 1, 2, p. 190-198 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

30 Citations (Scopus)

1999

A neural network model approach to the study of human TAP transporter.

Brusic, V., van Endert, P., Zeleznikow, J., Daniel, S., Hammer, J. & Petrovsky, N., 1999, In: In Silico Biology. 1, 2, p. 109-121 13 p.

Research output: Journal Publication › Article › peer-review

49 Citations (Scopus)

Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans

Dornan, J., Page, A. P., Taylor, P., Wu, S. Y., Winter, A. D., Husi, H. & Walkinshaw, M. D., 3 Dec 1999, In: Journal of Biological Chemistry. 274, 49, p. 34877-34883 7 p.

Research output: Journal Publication › Article › peer-review

Open Access

43 Citations (Scopus)

1998

A novel system to quantitate nuclear-cytoplasmic flux in vivo: Kinetics of signal-dependent nuclear protein export

Efthymiadis, A., Dottorini, T. & Jans, D. A., 15 Jul 1998, In: Archives of Biochemistry and Biophysics. 355, 2, p. 254-261 8 p.

Research output: Journal Publication › Article › peer-review

14 Citations (Scopus)

Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network

Brusic, V., Rudy, G., Honeyman, M., Hammer, J. & Harrison, L., 1998, In: Bioinformatics. 14, 2, p. 121-130 10 p.

Research output: Journal Publication › Article › peer-review

Open Access

251 Citations (Scopus)

The X-ray structure of a divergent cyclophilin from the nematode parasite Brugia malayi

Taylor, P., Page, A. P., Kontopidis, G., Husi, H. & Walkinshaw, M. D., 27 Mar 1998, In: FEBS Letters. 425, 2, p. 361-366 6 p.

Research output: Journal Publication › Article › peer-review

26 Citations (Scopus)

1997

Prediction of substrate-specific pockets in cyclosporin synthetase

Husi, H., Schörgendorfer, K., Stempfer, G., Taylor, P. & Walkinshaw, M. D., 15 Sept 1997, In: FEBS Letters. 414, 3, p. 532-536 5 p.

Research output: Journal Publication › Article › peer-review

Open Access

12 Citations (Scopus)

Structures of cyclophilin-ligand complexes

Taylor, P., Husi, H., Kontopidis, G. & Walkinshaw, M. D., 1997, In: Progress in Biophysics and Molecular Biology. 67, 2-3, p. 155-181 27 p.

Research output: Journal Publication › Review article › peer-review

Open Access

36 Citations (Scopus)

1995

Similar peptides from two beta cell autoantigens, proinsulin and glutamic acid decarboxylase, stimulate T cells of individuals at risk for insulin-dependent diabetes

Rudy, G., Stone, N., Harrison, L. C., Colman, P. G., McNair, P., Brusic, V., French, M. B., Honeyman, M. C., Tait, B. & Lew, A. M., 1995, In: Molecular Medicine. 1, 6, p. 625-633 9 p.

Research output: Journal Publication › Article › peer-review

Open Access

95 Citations (Scopus)

1994

Comparative Binding Studies of Cyclophilins to Cyclosporine A and Derivatives by Fluorescence Measurements

Husi, H. & Zurini, M. G. M., Oct 1994, In: Analytical Biochemistry. 222, 1, p. 251-255 5 p.

Research output: Journal Publication › Article › peer-review

31 Citations (Scopus)

Mapping of the immunophilin-immunosuppressant site of interaction on calcineurin

Husi, H., Luyten, M. A. & Zurini, M. G. M., 13 May 1994, In: Journal of Biological Chemistry. 269, 19, p. 14199-14204 6 p.

Research output: Journal Publication › Article › peer-review

50 Citations (Scopus)

1993

MEDULLARY BONE AND AVIAN CALCIUM REGULATION

Dacke, C. G., Arkle, S., Cook, D. J., Wormstone, I. M., Jones, S., Zaidi, M. & Bascal, Z. A., Nov 1993, In: Journal of Experimental Biology. 184, 1, p. 63-88 26 p.

Research output: Journal Publication › Article › peer-review

Open Access

192 Citations (Scopus)

1992

Further studies on interactions between periaqueductal gray, nucleus accumbens and habenula in antinociception

Ma, Q. P., Shi, Y. S. & Han, J. S., 1992, In: Brain Research. 583, 1-2, p. 292-295 4 p.

Research output: Journal Publication › Article › peer-review

50 Citations (Scopus)

Identification of several cyclosporine binding proteins in lymphoid and non-lymphoid cells in vivo

Foxwell, B. M. J., Woerly, G., Husi, H., Mackie, A., Quesniaux, V. F. J., Hiestand, P. C., Wenger, R. M. & Ryffel, B., 14 Feb 1992, In: Biochimica et Biophysica Acta - Molecular Basis of Disease. 1138, 2, p. 115-121 7 p.

Research output: Journal Publication › Article › peer-review

39 Citations (Scopus)

1991

Neurochemical studies on the mesolimbic circuitry of antinociception

Ma, Q. P. & Han, J. S., 6 Dec 1991, In: Brain Research. 566, 1-2, p. 95-102 8 p.

Research output: Journal Publication › Article › peer-review

40 Citations (Scopus)

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