Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria

Priyia Pusparajah; Jodi Woan Fei Law; Kok Gan Chan; Bey Hing Goh; Kar Wai Hong; Learn Han Lee; Loh Teng Hern Tan

doi:10.36877/pmmb.a0000330

Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria

Priyia Pusparajah
, Jodi Woan Fei Law
, Kok Gan Chan
, Bey Hing Goh
, Kar Wai Hong^*
, Learn Han Lee^*
, Loh Teng Hern Tan^*

^*Corresponding author for this work

Research output: Journal Publication › Article › peer-review

17 Citations (Scopus)

Abstract

Streptomyces pluripotens strain MUM 16J is a Gram-positive filamentous bacteria isolated from mangrove soil in Kampung Trombol area of Kuching, Sarawak. The draft genome of Streptomyces pluripotens strain MUM 16J consists of 7,671,699 bp assembled into 164 contigs. The GC content of the genome is 70.06 %, and the sequencing coverage of 108×. Its genome consists of 6,781 predicted genes, 6,459 protein-coding genes, and 79 RNA-coding genes (tRNA: 71, rRNA: 8). Here we report the draft genome of this strain to highlight its potential in producing glycopeptide antibiotic as well as catechol, a biocontrol agent of biofilm-producing bacteria.

Original language	English
Article number	a0000330
Journal	Progress in Microbes and Molecular Biology
Volume	6
Issue number	1
DOIs	https://doi.org/10.36877/pmmb.a0000330
Publication status	Published - 4 Jan 2023
Externally published	Yes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 2 Zero Hunger

Free Keywords

Malaysia
Streptomyces pluripotens
antibiofilm
catechol
genome
glycopeptide

ASJC Scopus subject areas

Microbiology
Molecular Biology
Biochemistry, Genetics and Molecular Biology (miscellaneous)
Microbiology (medical)

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10.36877/pmmb.a0000330

Cite this

Pusparajah, P., Law, J. W. F., Chan, K. G., Goh, B. H., Hong, K. W., Lee, L. H., & Tan, L. T. H. (2023). Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria. Progress in Microbes and Molecular Biology, 6(1), Article a0000330. https://doi.org/10.36877/pmmb.a0000330

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title = "Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria",

abstract = "Streptomyces pluripotens strain MUM 16J is a Gram-positive filamentous bacteria isolated from mangrove soil in Kampung Trombol area of Kuching, Sarawak. The draft genome of Streptomyces pluripotens strain MUM 16J consists of 7,671,699 bp assembled into 164 contigs. The GC content of the genome is 70.06 \%, and the sequencing coverage of 108×. Its genome consists of 6,781 predicted genes, 6,459 protein-coding genes, and 79 RNA-coding genes (tRNA: 71, rRNA: 8). Here we report the draft genome of this strain to highlight its potential in producing glycopeptide antibiotic as well as catechol, a biocontrol agent of biofilm-producing bacteria.",

keywords = "Malaysia, Streptomyces pluripotens, antibiofilm, catechol, genome, glycopeptide",

author = "Priyia Pusparajah and Law, \{Jodi Woan Fei\} and Chan, \{Kok Gan\} and Goh, \{Bey Hing\} and Hong, \{Kar Wai\} and Lee, \{Learn Han\} and Tan, \{Loh Teng Hern\}",

year = "2023",

month = jan,

day = "4",

doi = "10.36877/pmmb.a0000330",

language = "English",

volume = "6",

journal = "Progress in Microbes and Molecular Biology",

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Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria. / Pusparajah, Priyia; Law, Jodi Woan Fei; Chan, Kok Gan et al.
In: Progress in Microbes and Molecular Biology, Vol. 6, No. 1, a0000330, 04.01.2023.

Research output: Journal Publication › Article › peer-review

TY - JOUR

T1 - Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria

AU - Pusparajah, Priyia

AU - Law, Jodi Woan Fei

AU - Chan, Kok Gan

AU - Goh, Bey Hing

AU - Hong, Kar Wai

AU - Lee, Learn Han

AU - Tan, Loh Teng Hern

PY - 2023/1/4

Y1 - 2023/1/4

N2 - Streptomyces pluripotens strain MUM 16J is a Gram-positive filamentous bacteria isolated from mangrove soil in Kampung Trombol area of Kuching, Sarawak. The draft genome of Streptomyces pluripotens strain MUM 16J consists of 7,671,699 bp assembled into 164 contigs. The GC content of the genome is 70.06 %, and the sequencing coverage of 108×. Its genome consists of 6,781 predicted genes, 6,459 protein-coding genes, and 79 RNA-coding genes (tRNA: 71, rRNA: 8). Here we report the draft genome of this strain to highlight its potential in producing glycopeptide antibiotic as well as catechol, a biocontrol agent of biofilm-producing bacteria.

AB - Streptomyces pluripotens strain MUM 16J is a Gram-positive filamentous bacteria isolated from mangrove soil in Kampung Trombol area of Kuching, Sarawak. The draft genome of Streptomyces pluripotens strain MUM 16J consists of 7,671,699 bp assembled into 164 contigs. The GC content of the genome is 70.06 %, and the sequencing coverage of 108×. Its genome consists of 6,781 predicted genes, 6,459 protein-coding genes, and 79 RNA-coding genes (tRNA: 71, rRNA: 8). Here we report the draft genome of this strain to highlight its potential in producing glycopeptide antibiotic as well as catechol, a biocontrol agent of biofilm-producing bacteria.

KW - Malaysia

KW - Streptomyces pluripotens

KW - antibiofilm

KW - catechol

KW - genome

KW - glycopeptide

UR - https://www.scopus.com/pages/publications/85159411228

U2 - 10.36877/pmmb.a0000330

DO - 10.36877/pmmb.a0000330

M3 - Article

AN - SCOPUS:85159411228

SN - 2637-1049

VL - 6

JO - Progress in Microbes and Molecular Biology

JF - Progress in Microbes and Molecular Biology

IS - 1

M1 - a0000330

ER -

Whole-Genome Sequence of Streptomyces pluripotens strain MUM 16J, a Potential Resource of Glycopeptide Antibiotic and Biocontrol Agent against Biofilm-forming Bacteria

Abstract

UN SDGs

Free Keywords

ASJC Scopus subject areas

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