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ACGM: Attribute-Centric Graph Modeling Network for Concurrent Missing Tabular Data Imputation and COVID-19 Prognosis

  • Zhuoru Wu
  • , Wenting Chen*
  • , Xuechen Li
  • , Filippo Ruffini
  • , Shaonan Liu
  • , Lorenzo Tronchin
  • , Domenico Albano
  • , Eliodoro Faiella
  • , Deborah Fazzini
  • , Domiziana Santucci
  • , Xiaoling Luo
  • , Valerio Guarrasi
  • , Paolo Soda
  • , Linlin Shen*
  • *Corresponding author for this work

Research output: Journal PublicationArticlepeer-review

Abstract

COVID-19 prognosis using clinical tabular data faces significant challenges due to missing values and class imbalance issues. Existing methods often overlook the complex high-order interrelationship among clinicalattributes and struggle with training stability on imbalanced datasets. We propose ACGM, an attribute-centric graph modeling network that simultaneously addresses missing data imputation and COVID-19 prognosis. ACGM consists of three key modules: an attributes preprocessing module (APM) for coarse-grained imputation initialization, a graph-enhanced attributes imputation module (GEAIM) that models high-order inter-attribute relationships through graph structures, and a graph-enhanced disease prognosis module (GEDPM) that leverages these complex attribute interactions for final prediction. GEAIM and GEDPM employ a mean-teacher strategy with attributes graph matching to preserve high-order relationships, enhance training stability, and maintain structural integrity of attribute interactions. Extensive experiments are conducted on four public COVID-19 tabular datasets, demonstrating the superiority of our ACGM over existing methods. Through comprehensive interpretability analysis, we identify that attributes such as LDH, Difficulty In Breathing, and SaO2 significantly impact COVID-19 prognosis, aligning well with clinical insights and radiologist assessments.

Original languageEnglish
Pages (from-to)3307-3320
Number of pages14
JournalIEEE Journal of Biomedical and Health Informatics
Volume30
Issue number4
DOIs
Publication statusPublished - 1 Apr 2026
Externally publishedYes

Free Keywords

  • COVID-19 prognosis
  • attribute-centric
  • graph
  • missing tabular data imputation

ASJC Scopus subject areas

  • Computer Science Applications
  • Health Informatics
  • Electrical and Electronic Engineering
  • Health Information Management

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